MRIQC: individual T1w report

Summary

  • BIDS filename: sub-231117IBLS04_ses-231117IBLS04_T1w.
  • Date and time: 2023-11-23, 09:05.
  • MRIQC version: 22.0.6.

Visual reports

Zoomed-in (brain mask)
2023-11-23T09:01:31.789686 image/svg+xml Matplotlib v3.5.2, https://matplotlib.org/
Background noise
2023-11-23T08:58:36.901152 image/svg+xml Matplotlib v3.5.2, https://matplotlib.org/

Other

cjv0.3404824413199305
cnr3.7397934670471447
efc0.5310809478016508
fber5833.6967668960315
fwhmavg4.062796666666666
fwhmx4.21469
fwhmy4.06536
fwhmz3.90834
icvscsf0.2051232616003943
icvsgm0.4538435819557907
icvswm0.341033156443815
inumed0.4928629696369171
inurange0.1991374075412749
qi10.00015013877163003387
qi20.004792821411350609
rpvecsf22.77205889597147
rpvegm10.982222902787033
rpvewm16.202051132838108
sizex176
sizey230
sizez230
snrcsf2.344149234779899
snrgm12.981224067524177
snrtotal13.648115797792158
snrwm25.618974091072396
snrdcsf24.567383289732792
snrdgm68.81284679899922
snrdtotal62.41551041430747
snrdwm93.86630115419041
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk1093.7797767320044
summarybgmad6.9796564266074235
summarybgmean8.396000727183301
summarybgmedian4.707706719636917
summarybgn2606239.0
summarybgp050.0
summarybgp9526.75085112452507
summarybgstdv19.51401914605082
summarycsfk2.0493367802475806
summarycsfmad93.71215172783202
summarycsfmean276.725153247976
summarycsfmedian261.73464741557837
summarycsfn38142.0
summarycsfp05106.4232488758862
summarycsfp95486.11225739121437
summarycsfstdv111.6529666516892
summarygmk0.23096545556355919
summarygmmad54.29762131875481
summarygmmean732.8021734237298
summarygmmedian733.114552013576
summarygmn37570.0
summarygmp05639.2636493183672
summarygmp95825.9560670033095
summarygmstdv56.47424245101941
summarywmk0.47688328698068894
summarywmmad36.58161103592479
summarywmmean1000.9927181829861
summarywmmedian1000.027676820755
summarywmn172811.0
summarywmp05938.7721046805382
summarywmp951067.541729658842
summarywmstdv39.03453666205313
tpmoverlapcsf0.14293616198343354
tpmoverlapgm0.47367844201119064
tpmoverlapwm0.5027335095491199
wm2max0.68122995661196

AcquisitionMatrixPE230
AcquisitionNumber1
AcquisitionTime14:13:7.040000
BaseResolution230
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20210317
DataSource{'application/x-xnat': {'experiment': '231117_IBL_S04', 'experiment_id': 'CNC_Archive_E02780', 'project': 'Reinhart_IBL', 'scan': 8, 'subject': '231117_IBL_S04', 'subject_id': 'CNC_Archive_S02567', 'url': 'https://xnat.bu.edu'}}
DeviceSerialNumber166024
DwellTime3.3e-06
EchoTime0.00167
FlipAngle7
ImageOrientationPatientDICOM[0.0675592, 0.996116, 0.0564728, -0.0363975, 0.0590251, -0.997593]
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.249
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressCommonwealth Ave. 610,Boston,Massachusetts,US,02215
InstitutionNameBU
InstitutionalDepartmentNameResearch
InversionTime1.1
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
NumberOfAverages4
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps230
PhaseResolution1
PixelBandwidth660
ProcedureStepDescriptionINVESTIGATORS^Reinhart
ProtocolNameT1_MEMPRAGE_1.0mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE230
RefLinesPE32
RepetitionTime2.2
SAR0.0455766
ScanOptionsIR
ScanningSequenceGR\IR
SequenceNametfl3d4_176ns
SequenceVariantSK\SP\MP
SeriesDescriptionT1_MEMPRAGE_1.0mm_p2 RMS
SeriesNumber8
ShimSetting[-924, -7109, 3732, 304, -8, -644, -89, -10]
SliceThickness1
SoftwareVersionssyngo MR E11
StationNameAWP166024-4CA74C
TxRefAmp216.42
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot

md5sumabc8cd9ff6a6eb2132e0d4ec8be815fc
softwaremriqc
version22.0.6
Rate Image

  • Exclude
  • Poor
  • Acceptable
  • Excellent

Comments

Rater confidence:

  • Doubtful
  • Confident
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.